Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC105917.1-201ENST00000506637 2539 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SNX18-202ENST00000343017 3140 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PP12613-201ENST00000424958 2230 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 KRT8P20-201ENST00000423953 1409 ntBASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AC105020.1-201ENST00000435356 2205 ntBASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AL358852.1-201ENST00000623174 1268 ntBASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AL137784.3-201ENST00000623858 2288 ntBASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms