Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
RTL9Q8NET4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTL9Q8NET4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RTL9Q8NET4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 PTCHD3P3-201ENST00000403073 906 ntBASIC21.58■■□□□ 1.04
RTL9Q8NET4 CRYGEP-201ENST00000412192 528 ntBASIC21.58■■□□□ 1.04
RTL9Q8NET4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 OR7E47P-204ENST00000575924 449 ntBASIC21.58■■□□□ 1.04
RTL9Q8NET4 MIR4751-201ENST00000578027 74 ntBASIC21.58■■□□□ 1.04
RTL9Q8NET4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTL9Q8NET4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.58■■□□□ 1.04
RTL9Q8NET4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 MTDHP5-201ENST00000598980 586 ntBASIC21.57■■□□□ 1.04
RTL9Q8NET4 AC004790.2-201ENST00000623588 572 ntBASIC21.57■■□□□ 1.04
RTL9Q8NET4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
RTL9Q8NET4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTL9Q8NET4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 MRPL20P1-201ENST00000400819 433 ntBASIC21.56■■□□□ 1.04
RTL9Q8NET4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.56■■□□□ 1.04
RTL9Q8NET4 ALG1L5P-201ENST00000482043 771 ntBASIC21.56■■□□□ 1.04
RTL9Q8NET4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTL9Q8NET4 AL590787.1-201ENST00000568856 1315 ntBASIC21.56■■□□□ 1.04
RTL9Q8NET4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 ABALON-201ENST00000629058 1903 ntBASIC21.56■■□□□ 1.04
RTL9Q8NET4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.56■■□□□ 1.04
RTL9Q8NET4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 AC211486.1-202ENST00000416371 468 ntBASIC21.55■■□□□ 1.04
RTL9Q8NET4 AC211476.1-201ENST00000503899 468 ntBASIC21.55■■□□□ 1.04
RTL9Q8NET4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 GGTLC5P-201ENST00000617623 998 ntBASIC21.55■■□□□ 1.04
RTL9Q8NET4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms