Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 MIR7706-201ENST00000613747 67 ntBASIC18.5■□□□□ 0.55
TTC16Q8NEE8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 AC007613.1-201ENST00000572811 2597 ntBASIC18.5■□□□□ 0.55
TTC16Q8NEE8 REXO1L9P-201ENST00000604264 2108 ntBASIC18.5■□□□□ 0.55
TTC16Q8NEE8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC16Q8NEE8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AL356309.3-201ENST00000624132 1934 ntBASIC18.49■□□□□ 0.55
TTC16Q8NEE8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AC018470.1-201ENST00000624790 3129 ntBASIC18.49■□□□□ 0.55
TTC16Q8NEE8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 RNA5SP419-201ENST00000515908 135 ntBASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AC021087.4-201ENST00000563761 564 ntBASIC18.49■□□□□ 0.55
TTC16Q8NEE8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.49■□□□□ 0.55
TTC16Q8NEE8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC16Q8NEE8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 FAM220CP-201ENST00000395253 831 ntBASIC18.48■□□□□ 0.55
TTC16Q8NEE8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 FAM215A-202ENST00000632077 792 ntBASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC16Q8NEE8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TTC16Q8NEE8 AC004817.3-201ENST00000602957 2129 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms