Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 AL020989.1-201ENST00000422979 469 ntBASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 HMGN1P19-201ENST00000436976 333 ntBASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 KRT18P2-201ENST00000447938 1258 ntBASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
COLGALT1Q8NBJ5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ELK2BP-201ENST00000415014 1224 ntBASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 DNAJB3-202ENST00000449667 1266 ntBASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 DUTP2-201ENST00000519164 463 ntBASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 AL355385.1-201ENST00000606123 409 ntBASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 AC004706.3-202ENST00000621574 984 ntBASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
COLGALT1Q8NBJ5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 AL353593.2-201ENST00000602529 1483 ntBASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 AC027796.2-201ENST00000575326 344 ntBASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 ABALON-201ENST00000629058 1903 ntBASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 AC006504.4-201ENST00000592118 1568 ntBASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COLGALT1Q8NBJ5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.92■□□□□ 0.62
COLGALT1Q8NBJ5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms