Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 TPSP2-201ENST00000561760 610 ntBASIC18.12■□□□□ 0.49
PAF1Q8N7H5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 DRAXINP1-201ENST00000437611 948 ntBASIC18.11■□□□□ 0.49
PAF1Q8N7H5 AC112698.1-201ENST00000510299 916 ntBASIC18.11■□□□□ 0.49
PAF1Q8N7H5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 NPAP1P7-201ENST00000613027 823 ntBASIC18.11■□□□□ 0.49
PAF1Q8N7H5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.11■□□□□ 0.49
PAF1Q8N7H5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 AC233702.3-201ENST00000578656 1387 ntBASIC18.11■□□□□ 0.49
PAF1Q8N7H5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PAF1Q8N7H5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AC068472.1-201ENST00000474589 881 ntBASIC18.1■□□□□ 0.49
PAF1Q8N7H5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AC099336.1-202ENST00000602961 463 ntBASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AC138894.3-201ENST00000603787 634 ntBASIC18.1■□□□□ 0.49
PAF1Q8N7H5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 AP000997.3-201ENST00000623333 2250 ntBASIC18.1■□□□□ 0.49
PAF1Q8N7H5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PAF1Q8N7H5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms