Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF2Q8N5M1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 FZD10-202ENST00000539839 3282 ntBASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 BNIP3P18-201ENST00000593976 575 ntBASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 TP73-AS1-210ENST00000637775 1455 ntBASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF2Q8N5M1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC002558.1-201ENST00000488906 803 ntBASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC122714.2-201ENST00000502787 707 ntBASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC011467.2-201ENST00000598425 242 ntBASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC099336.1-202ENST00000602961 463 ntBASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 AC026471.1-201ENST00000564629 3026 ntBASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF2Q8N5M1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.05■□□□□ 0.48
ATPAF2Q8N5M1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF2Q8N5M1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF2Q8N5M1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms