Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NME8Q8N427 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.36■□□□□ 0.69
NME8Q8N427 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.36■□□□□ 0.69
NME8Q8N427 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.36■□□□□ 0.69
NME8Q8N427 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 KLF4P1-201ENST00000412782 1185 ntBASIC19.36■□□□□ 0.69
NME8Q8N427 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
NME8Q8N427 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.36■□□□□ 0.69
NME8Q8N427 IGHV3-52-201ENST00000519770 353 ntBASIC19.36■□□□□ 0.69
NME8Q8N427 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 AC109462.3-201ENST00000573934 613 ntBASIC19.36■□□□□ 0.69
NME8Q8N427 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.36■□□□□ 0.69
NME8Q8N427 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.36■□□□□ 0.69
NME8Q8N427 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
NME8Q8N427 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.36■□□□□ 0.69
NME8Q8N427 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NME8Q8N427 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.36■□□□□ 0.69
NME8Q8N427 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.36■□□□□ 0.69
NME8Q8N427 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NME8Q8N427 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
NME8Q8N427 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 NEFHP1-201ENST00000412845 2629 ntBASIC19.35■□□□□ 0.69
NME8Q8N427 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.35■□□□□ 0.69
NME8Q8N427 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.35■□□□□ 0.69
NME8Q8N427 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.35■□□□□ 0.69
NME8Q8N427 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.35■□□□□ 0.69
NME8Q8N427 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
NME8Q8N427 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.35■□□□□ 0.69
NME8Q8N427 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NME8Q8N427 AC100803.2-201ENST00000562459 1963 ntBASIC19.35■□□□□ 0.69
NME8Q8N427 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
NME8Q8N427 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.35■□□□□ 0.69
NME8Q8N427 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NME8Q8N427 NCF1C-201ENST00000438382 1427 ntBASIC19.34■□□□□ 0.69
NME8Q8N427 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.34■□□□□ 0.69
NME8Q8N427 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NME8Q8N427 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.34■□□□□ 0.69
NME8Q8N427 RNA5SP416-201ENST00000516838 111 ntBASIC19.34■□□□□ 0.69
NME8Q8N427 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.34■□□□□ 0.69
NME8Q8N427 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.34■□□□□ 0.69
NME8Q8N427 AC040169.1-201ENST00000565382 521 ntBASIC19.34■□□□□ 0.69
NME8Q8N427 STK25P1-201ENST00000585406 838 ntBASIC19.34■□□□□ 0.69
NME8Q8N427 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 AC009949.1-201ENST00000623048 1830 ntBASIC19.34■□□□□ 0.69
NME8Q8N427 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.34■□□□□ 0.69
NME8Q8N427 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NME8Q8N427 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NME8Q8N427 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
NME8Q8N427 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NME8Q8N427 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
NME8Q8N427 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.33■□□□□ 0.69
NME8Q8N427 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.33■□□□□ 0.69
NME8Q8N427 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NME8Q8N427 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NME8Q8N427 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NME8Q8N427 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.33■□□□□ 0.69
NME8Q8N427 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms