Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF28Q8N1W1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC023141.13-201ENST00000604991 943 ntBASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 AC025580.3-201ENST00000617932 1424 ntBASIC24.15■■□□□ 1.46
ARHGEF28Q8N1W1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 AC087289.5-201ENST00000586076 3175 ntBASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ARHGEF28Q8N1W1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
ARHGEF28Q8N1W1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 AL513480.1-201ENST00000451731 511 ntBASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 AC007064.4-201ENST00000637740 555 ntBASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 CYMP-203ENST00000474680 1263 ntBASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 PI4KAP1-204ENST00000612579 1703 ntBASIC24.13■■□□□ 1.45
ARHGEF28Q8N1W1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 CEND1P1-201ENST00000451006 455 ntBASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 AC022145.2-201ENST00000598203 171 ntBASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms