Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 RCN1P1-201ENST00000400413 996 ntBASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 AC096633.1-201ENST00000422446 749 ntBASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC83Q8IWF9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 AL671277.2-201ENST00000458060 996 ntBASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC83Q8IWF9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 DUX4L26-201ENST00000489078 1255 ntBASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms