Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF135Q8IUD6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 MTCL1P1-201ENST00000446207 792 ntBASIC18.66■□□□□ 0.58
RNF135Q8IUD6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 AC008687.5-201ENST00000593746 558 ntBASIC18.66■□□□□ 0.58
RNF135Q8IUD6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 AC097374.2-201ENST00000618617 1306 ntBASIC18.66■□□□□ 0.58
RNF135Q8IUD6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF135Q8IUD6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 MIR1199-201ENST00000621445 119 ntBASIC18.65■□□□□ 0.58
RNF135Q8IUD6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF135Q8IUD6 SDHAP2-201ENST00000455183 2001 ntBASIC18.64■□□□□ 0.58
RNF135Q8IUD6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 PKD1P1-201ENST00000458669 6805 ntBASIC18.64■□□□□ 0.57
RNF135Q8IUD6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.64■□□□□ 0.57
RNF135Q8IUD6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AC005593.1-201ENST00000624894 515 ntBASIC18.64■□□□□ 0.57
RNF135Q8IUD6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AC002310.6-201ENST00000624451 1377 ntBASIC18.64■□□□□ 0.57
RNF135Q8IUD6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 AC009102.3-201ENST00000623118 1491 ntBASIC18.64■□□□□ 0.57
RNF135Q8IUD6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF135Q8IUD6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms