Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CLEC4GP1-201ENST00000596555 870 ntBASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 AL732292.2-201ENST00000609649 430 ntBASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 BX276092.7-203ENST00000637198 1536 ntBASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 AC141586.5-201ENST00000624546 2050 ntBASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11FIP4Q86YS3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 MIR3652-201ENST00000579335 131 ntBASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAB11FIP4Q86YS3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB11FIP4Q86YS3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB11FIP4Q86YS3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.64■□□□□ 0.9
RAB11FIP4Q86YS3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB11FIP4Q86YS3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB11FIP4Q86YS3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 AC097374.2-201ENST00000618617 1306 ntBASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 COX5BP2-201ENST00000392354 334 ntBASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB11FIP4Q86YS3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11FIP4Q86YS3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB11FIP4Q86YS3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RAB11FIP4Q86YS3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms