Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 AC079416.2-201ENST00000625035 1193 ntBASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LYSMD3Q7Z3D4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LYSMD3Q7Z3D4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.71■□□□□ 0.42
LYSMD3Q7Z3D4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 INTS4P1-201ENST00000438455 1935 ntBASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD3Q7Z3D4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 AC122714.2-201ENST00000502787 707 ntBASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 AL732292.2-201ENST00000609649 430 ntBASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 LINC00304-203ENST00000565008 1864 ntBASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD3Q7Z3D4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 MIR5100-201ENST00000579544 119 ntBASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD3Q7Z3D4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms