Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 AC132008.2-207ENST00000454517 770 ntBASIC16.91■□□□□ 0.3
RNF44Q7L0R7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AC103564.2-201ENST00000432853 1299 ntBASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 ABCD1P5-201ENST00000445663 754 ntBASIC16.9■□□□□ 0.3
RNF44Q7L0R7 FAAHP1-202ENST00000446499 1238 ntBASIC16.9■□□□□ 0.3
RNF44Q7L0R7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 EMBP1-201ENST00000458200 901 ntBASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AC106795.1-205ENST00000512851 1056 ntBASIC16.9■□□□□ 0.3
RNF44Q7L0R7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF44Q7L0R7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.89■□□□□ 0.3
RNF44Q7L0R7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RNF44Q7L0R7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF44Q7L0R7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.89■□□□□ 0.3
RNF44Q7L0R7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF44Q7L0R7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TPM4P1-201ENST00000436100 807 ntBASIC16.89■□□□□ 0.29
RNF44Q7L0R7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 AP001269.4-201ENST00000609611 512 ntBASIC16.89■□□□□ 0.29
RNF44Q7L0R7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF44Q7L0R7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms