Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 AC093787.1-201ENST00000450396 207 ntBASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 AC105917.1-201ENST00000506637 2539 ntBASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 AC006449.5-201ENST00000610658 2098 ntBASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CDCA4P2-201ENST00000441182 718 ntBASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP4Q6PIL6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP4Q6PIL6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms