Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 AL138828.2-201ENST00000615812 383 ntBASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF38BQ5VTL8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 FEM1AP3-201ENST00000403722 1741 ntBASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 MIR663B-201ENST00000408361 115 ntBASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 AC009477.1-201ENST00000452936 217 ntBASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF38BQ5VTL8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 BRWD1P1-201ENST00000401091 371 ntBASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 MPRIPP1-201ENST00000452433 1089 ntBASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 RN7SL837P-201ENST00000463010 287 ntBASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 SPDYE12P-201ENST00000618416 771 ntBASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.9■□□□□ 0.62
PRPF38BQ5VTL8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PRPF38BQ5VTL8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.89■□□□□ 0.62
PRPF38BQ5VTL8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRPF38BQ5VTL8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRPF38BQ5VTL8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRPF38BQ5VTL8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms