Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 MIR4497-201ENST00000583208 89 ntBASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RUNDC3AQ59EK9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 TSPY12P-201ENST00000421279 868 ntBASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 RASA4DP-201ENST00000460726 1199 ntBASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 AP006294.2-201ENST00000641667 209 ntBASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RUNDC3AQ59EK9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 KRT18P48-201ENST00000434763 852 ntBASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AL136038.4-201ENST00000603606 1261 ntBASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AL139327.4-201ENST00000612362 153 ntBASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 AL138966.2-201ENST00000621997 464 ntBASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RUNDC3AQ59EK9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms