Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.59■□□□□ 0.89
GABPAQ06546 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.59■□□□□ 0.89
GABPAQ06546 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GABPAQ06546 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.59■□□□□ 0.89
GABPAQ06546 RPS15P9-201ENST00000494093 319 ntBASIC20.59■□□□□ 0.89
GABPAQ06546 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.59■□□□□ 0.89
GABPAQ06546 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.59■□□□□ 0.89
GABPAQ06546 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.59■□□□□ 0.89
GABPAQ06546 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.59■□□□□ 0.89
GABPAQ06546 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 AC008667.4-201ENST00000607370 168 ntBASIC20.59■□□□□ 0.89
GABPAQ06546 AC139530.3-201ENST00000620344 690 ntBASIC20.59■□□□□ 0.89
GABPAQ06546 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
GABPAQ06546 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GABPAQ06546 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABPAQ06546 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.58■□□□□ 0.89
GABPAQ06546 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.58■□□□□ 0.89
GABPAQ06546 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 GPR89P-201ENST00000407924 1495 ntBASIC20.58■□□□□ 0.89
GABPAQ06546 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GABPAQ06546 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 LINC00982-205ENST00000420957 435 ntBASIC20.58■□□□□ 0.89
GABPAQ06546 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.58■□□□□ 0.89
GABPAQ06546 AC007967.2-201ENST00000432613 625 ntBASIC20.58■□□□□ 0.89
GABPAQ06546 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.58■□□□□ 0.89
GABPAQ06546 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABPAQ06546 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.58■□□□□ 0.89
GABPAQ06546 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.58■□□□□ 0.89
GABPAQ06546 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.58■□□□□ 0.89
GABPAQ06546 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
GABPAQ06546 AL805961.1-202ENST00000641562 540 ntBASIC20.58■□□□□ 0.89
GABPAQ06546 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.58■□□□□ 0.88
GABPAQ06546 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.58■□□□□ 0.88
GABPAQ06546 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
GABPAQ06546 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.58■□□□□ 0.88
GABPAQ06546 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.58■□□□□ 0.88
GABPAQ06546 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABPAQ06546 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
GABPAQ06546 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GABPAQ06546 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GABPAQ06546 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.57■□□□□ 0.88
GABPAQ06546 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GABPAQ06546 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.57■□□□□ 0.88
GABPAQ06546 BX842568.4-201ENST00000421222 227 ntBASIC20.57■□□□□ 0.88
GABPAQ06546 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.57■□□□□ 0.88
GABPAQ06546 AC108073.2-201ENST00000464002 357 ntBASIC20.57■□□□□ 0.88
GABPAQ06546 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.57■□□□□ 0.88
GABPAQ06546 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
GABPAQ06546 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
GABPAQ06546 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABPAQ06546 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GABPAQ06546 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 SLC25A6P5-201ENST00000435663 894 ntBASIC20.56■□□□□ 0.88
GABPAQ06546 KRT18P2-201ENST00000447938 1258 ntBASIC20.56■□□□□ 0.88
GABPAQ06546 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.56■□□□□ 0.88
GABPAQ06546 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.56■□□□□ 0.88
GABPAQ06546 AC064836.3-201ENST00000607928 673 ntBASIC20.56■□□□□ 0.88
GABPAQ06546 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.56■□□□□ 0.88
GABPAQ06546 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms