Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 DRAXINP1-201ENST00000437611 948 ntBASIC15.39■□□□□ 0.05
HIST1H3AP68431 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 TSSC2-201ENST00000450217 709 ntBASIC15.39■□□□□ 0.05
HIST1H3AP68431 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC091607.1-201ENST00000490318 1060 ntBASIC15.39■□□□□ 0.05
HIST1H3AP68431 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC087388.1-201ENST00000571370 1112 ntBASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.39■□□□□ 0.05
HIST1H3AP68431 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H3AP68431 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H3AP68431 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 IER3-202ENST00000376377 1350 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 MYCLP1-201ENST00000372451 1075 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 FAM220CP-201ENST00000395253 831 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 AC103564.2-201ENST00000432853 1299 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 AP002383.4-201ENST00000442518 975 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 AC009533.2-201ENST00000543664 586 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 AP005901.3-202ENST00000581653 237 ntBASIC15.38■□□□□ 0.05
HIST1H3AP68431 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H3AP68431 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H3AP68431 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 AL049757.1-201ENST00000616842 1596 ntBASIC15.37■□□□□ 0.05
HIST1H3AP68431 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H3AP68431 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H3AP68431 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H3AP68431 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H3AP68431 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H3AP68431 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H3AP68431 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms