Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.37■□□□□ 0.37
SRP54P61011 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.37■□□□□ 0.37
SRP54P61011 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 AC073592.5-201ENST00000624854 528 ntBASIC17.37■□□□□ 0.37
SRP54P61011 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.37■□□□□ 0.37
SRP54P61011 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 AP000997.3-201ENST00000623333 2250 ntBASIC17.37■□□□□ 0.37
SRP54P61011 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.37■□□□□ 0.37
SRP54P61011 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.37■□□□□ 0.37
SRP54P61011 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP54P61011 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.36■□□□□ 0.37
SRP54P61011 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.36■□□□□ 0.37
SRP54P61011 AC009949.1-201ENST00000623048 1830 ntBASIC17.36■□□□□ 0.37
SRP54P61011 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
SRP54P61011 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 RPL13AP23-201ENST00000480739 586 ntBASIC17.36■□□□□ 0.37
SRP54P61011 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.36■□□□□ 0.37
SRP54P61011 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 AC073592.4-201ENST00000623827 446 ntBASIC17.36■□□□□ 0.37
SRP54P61011 AL022326.1-202ENST00000641533 845 ntBASIC17.36■□□□□ 0.37
SRP54P61011 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRP54P61011 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP54P61011 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.35■□□□□ 0.37
SRP54P61011 SPDYE21P-201ENST00000413323 827 ntBASIC17.35■□□□□ 0.37
SRP54P61011 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.35■□□□□ 0.37
SRP54P61011 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.35■□□□□ 0.37
SRP54P61011 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 AC107918.4-202ENST00000641623 219 ntBASIC17.35■□□□□ 0.37
SRP54P61011 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 AC104581.1-202ENST00000635932 2618 ntBASIC17.35■□□□□ 0.37
SRP54P61011 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP54P61011 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP54P61011 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SRP54P61011 AC005332.8-201ENST00000622750 2735 ntBASIC17.34■□□□□ 0.37
SRP54P61011 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SRP54P61011 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SRP54P61011 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms