Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RAB38P57729 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB38P57729 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RAB38P57729 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 AC003669.1-201ENST00000334569 611 ntBASIC16.55■□□□□ 0.24
RAB38P57729 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 RBM17P3-201ENST00000417687 1192 ntBASIC16.55■□□□□ 0.24
RAB38P57729 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 UNC93B7-201ENST00000509439 705 ntBASIC16.55■□□□□ 0.24
RAB38P57729 AC106795.1-205ENST00000512851 1056 ntBASIC16.55■□□□□ 0.24
RAB38P57729 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.55■□□□□ 0.24
RAB38P57729 STK25P1-201ENST00000585406 838 ntBASIC16.55■□□□□ 0.24
RAB38P57729 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 AL139327.4-201ENST00000612362 153 ntBASIC16.55■□□□□ 0.24
RAB38P57729 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB38P57729 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB38P57729 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB38P57729 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAB38P57729 AP005117.1-201ENST00000584346 1413 ntBASIC16.54■□□□□ 0.24
RAB38P57729 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 AKR1C7P-201ENST00000305623 895 ntBASIC16.54■□□□□ 0.24
RAB38P57729 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB38P57729 KLF4P1-201ENST00000412782 1185 ntBASIC16.54■□□□□ 0.24
RAB38P57729 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB38P57729 SAPCD2P3-201ENST00000455031 850 ntBASIC16.54■□□□□ 0.24
RAB38P57729 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.54■□□□□ 0.24
RAB38P57729 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB38P57729 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
RAB38P57729 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB38P57729 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB38P57729 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 STK19B-204ENST00000512515 211 ntBASIC16.53■□□□□ 0.24
RAB38P57729 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RAB38P57729 AC132938.5-201ENST00000624980 1813 ntBASIC16.53■□□□□ 0.24
RAB38P57729 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB38P57729 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms