Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT3AP56704 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
WNT3AP56704 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.8■□□□□ 0.44
WNT3AP56704 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.8■□□□□ 0.44
WNT3AP56704 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT3AP56704 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT3AP56704 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
WNT3AP56704 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT3AP56704 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT3AP56704 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 AC109462.3-201ENST00000573934 613 ntBASIC17.8■□□□□ 0.44
WNT3AP56704 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
WNT3AP56704 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT3AP56704 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT3AP56704 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
WNT3AP56704 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT3AP56704 LYSMD4-203ENST00000378904 2122 ntBASIC17.8■□□□□ 0.44
WNT3AP56704 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT3AP56704 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
WNT3AP56704 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 AL645608.8-201ENST00000606034 2086 ntBASIC17.79■□□□□ 0.44
WNT3AP56704 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.79■□□□□ 0.44
WNT3AP56704 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.79■□□□□ 0.44
WNT3AP56704 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.79■□□□□ 0.44
WNT3AP56704 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.79■□□□□ 0.44
WNT3AP56704 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
WNT3AP56704 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.79■□□□□ 0.44
WNT3AP56704 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
WNT3AP56704 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
WNT3AP56704 AC104819.1-201ENST00000504587 486 ntBASIC17.79■□□□□ 0.44
WNT3AP56704 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.79■□□□□ 0.44
WNT3AP56704 AC096582.2-201ENST00000510860 516 ntBASIC17.79■□□□□ 0.44
WNT3AP56704 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.79■□□□□ 0.44
WNT3AP56704 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.79■□□□□ 0.44
WNT3AP56704 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
WNT3AP56704 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.79■□□□□ 0.44
WNT3AP56704 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.79■□□□□ 0.44
WNT3AP56704 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
WNT3AP56704 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT3AP56704 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
WNT3AP56704 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 CROCCP2-202ENST00000412962 2773 ntBASIC17.78■□□□□ 0.44
WNT3AP56704 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 AC012615.1-201ENST00000565797 1299 ntBASIC17.78■□□□□ 0.44
WNT3AP56704 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 AL139327.4-201ENST00000612362 153 ntBASIC17.78■□□□□ 0.44
WNT3AP56704 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WNT3AP56704 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms