Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC005104.2-201ENST00000427818 678 ntBASIC15.43■□□□□ 0.06
FOXG1P55316 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 FAM197Y8-203ENST00000450145 560 ntBASIC15.43■□□□□ 0.06
FOXG1P55316 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
FOXG1P55316 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXG1P55316 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXG1P55316 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXG1P55316 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXG1P55316 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXG1P55316 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.42■□□□□ 0.06
FOXG1P55316 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXG1P55316 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC021087.4-201ENST00000563761 564 ntBASIC15.42■□□□□ 0.06
FOXG1P55316 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.42■□□□□ 0.06
FOXG1P55316 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXG1P55316 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXG1P55316 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXG1P55316 AC079776.2-201ENST00000641154 1609 ntBASIC15.42■□□□□ 0.06
FOXG1P55316 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
FOXG1P55316 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 HTR7P1-202ENST00000624664 4411 ntBASIC15.42■□□□□ 0.06
FOXG1P55316 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXG1P55316 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 AL356309.3-201ENST00000624132 1934 ntBASIC15.41■□□□□ 0.06
FOXG1P55316 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXG1P55316 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 FDX1P1-201ENST00000449115 551 ntBASIC15.41■□□□□ 0.06
FOXG1P55316 AC002558.1-201ENST00000488906 803 ntBASIC15.41■□□□□ 0.06
FOXG1P55316 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 STK25P1-201ENST00000585406 838 ntBASIC15.41■□□□□ 0.06
FOXG1P55316 SLC25A6P4-201ENST00000586535 553 ntBASIC15.41■□□□□ 0.06
FOXG1P55316 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXG1P55316 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms