Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH11P55287 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 SPDYE15P-201ENST00000424157 909 ntBASIC16.17■□□□□ 0.18
CDH11P55287 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 FAM86EP-206ENST00000510506 987 ntBASIC16.17■□□□□ 0.18
CDH11P55287 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH11P55287 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH11P55287 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CDH11P55287 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH11P55287 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH11P55287 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH11P55287 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH11P55287 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH11P55287 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CDH11P55287 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.16■□□□□ 0.18
CDH11P55287 AC024243.1-201ENST00000609234 778 ntBASIC16.16■□□□□ 0.18
CDH11P55287 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 LINC01311-201ENST00000565162 1445 ntBASIC16.16■□□□□ 0.18
CDH11P55287 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH11P55287 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CDH11P55287 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.16■□□□□ 0.18
CDH11P55287 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH11P55287 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH11P55287 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH11P55287 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH11P55287 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH11P55287 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 AC132938.6-201ENST00000623828 1655 ntBASIC16.15■□□□□ 0.18
CDH11P55287 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH11P55287 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.15■□□□□ 0.18
CDH11P55287 MIR3180-4-201ENST00000582223 153 ntBASIC16.15■□□□□ 0.18
CDH11P55287 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH11P55287 AC083849.1-201ENST00000615227 514 ntBASIC16.15■□□□□ 0.18
CDH11P55287 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH11P55287 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH11P55287 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.15■□□□□ 0.18
CDH11P55287 AC093458.2-201ENST00000623150 629 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms