Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AL139288.1-201ENST00000623748 933 ntBASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 FAAHP1-202ENST00000446499 1238 ntBASIC19.24■□□□□ 0.67
NCKAP1LP55160 AC079781.3-201ENST00000449110 356 ntBASIC19.24■□□□□ 0.67
NCKAP1LP55160 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 AL121912.1-201ENST00000603683 238 ntBASIC19.24■□□□□ 0.67
NCKAP1LP55160 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKAP1LP55160 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
NCKAP1LP55160 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NCKAP1LP55160 AL356309.3-201ENST00000624132 1934 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.23■□□□□ 0.67
NCKAP1LP55160 SART3-203ENST00000546611 1184 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.23■□□□□ 0.67
NCKAP1LP55160 NKAPP1-205ENST00000585790 367 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 AC104692.2-201ENST00000603054 253 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 AL031008.1-201ENST00000619963 541 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NCKAP1LP55160 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NCKAP1LP55160 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 AC046185.3-201ENST00000623228 1824 ntBASIC19.23■□□□□ 0.67
NCKAP1LP55160 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCKAP1LP55160 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 TP73-AS1-207ENST00000624167 988 ntBASIC19.22■□□□□ 0.67
NCKAP1LP55160 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms