Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHB3P54753 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
EPHB3P54753 CRYGEP-201ENST00000412192 528 ntBASIC18.35■□□□□ 0.53
EPHB3P54753 UPF3AP3-201ENST00000420996 769 ntBASIC18.35■□□□□ 0.53
EPHB3P54753 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
EPHB3P54753 AC005104.2-201ENST00000427818 678 ntBASIC18.35■□□□□ 0.53
EPHB3P54753 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
EPHB3P54753 RPS15P9-201ENST00000494093 319 ntBASIC18.35■□□□□ 0.53
EPHB3P54753 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHB3P54753 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.35■□□□□ 0.53
EPHB3P54753 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHB3P54753 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHB3P54753 AC002347.1-201ENST00000569543 541 ntBASIC18.35■□□□□ 0.53
EPHB3P54753 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EPHB3P54753 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHB3P54753 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 YBX2P1-201ENST00000394192 760 ntBASIC18.34■□□□□ 0.53
EPHB3P54753 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHB3P54753 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EPHB3P54753 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHB3P54753 MIR4751-201ENST00000578027 74 ntBASIC18.34■□□□□ 0.53
EPHB3P54753 AC010327.4-202ENST00000591484 748 ntBASIC18.34■□□□□ 0.53
EPHB3P54753 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHB3P54753 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHB3P54753 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHB3P54753 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB3P54753 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
EPHB3P54753 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
EPHB3P54753 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.33■□□□□ 0.53
EPHB3P54753 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
EPHB3P54753 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB3P54753 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 AC004832.2-201ENST00000426397 482 ntBASIC18.33■□□□□ 0.52
EPHB3P54753 AC108073.2-201ENST00000464002 357 ntBASIC18.33■□□□□ 0.52
EPHB3P54753 IGHV3-65-201ENST00000523210 341 ntBASIC18.33■□□□□ 0.52
EPHB3P54753 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 AC008667.4-201ENST00000607370 168 ntBASIC18.33■□□□□ 0.52
EPHB3P54753 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.33■□□□□ 0.52
EPHB3P54753 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB3P54753 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
EPHB3P54753 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB3P54753 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
EPHB3P54753 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB3P54753 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB3P54753 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
EPHB3P54753 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
EPHB3P54753 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB3P54753 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB3P54753 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB3P54753 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB3P54753 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHB3P54753 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
EPHB3P54753 AC023274.1-201ENST00000418278 595 ntBASIC18.32■□□□□ 0.52
EPHB3P54753 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB3P54753 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms