Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CACNA2D1P54289 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA2D1P54289 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 RBM17P3-201ENST00000417687 1192 ntBASIC18.66■□□□□ 0.58
CACNA2D1P54289 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 SART3-203ENST00000546611 1184 ntBASIC18.66■□□□□ 0.58
CACNA2D1P54289 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 AC019129.2-201ENST00000609837 1235 ntBASIC18.66■□□□□ 0.58
CACNA2D1P54289 AD001527.2-201ENST00000622994 785 ntBASIC18.66■□□□□ 0.58
CACNA2D1P54289 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA2D1P54289 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA2D1P54289 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 AL049757.1-201ENST00000616842 1596 ntBASIC18.65■□□□□ 0.58
CACNA2D1P54289 AC012317.2-201ENST00000623305 2251 ntBASIC18.65■□□□□ 0.58
CACNA2D1P54289 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 FAM197Y8-203ENST00000450145 560 ntBASIC18.65■□□□□ 0.58
CACNA2D1P54289 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 RNA5SP419-201ENST00000515908 135 ntBASIC18.65■□□□□ 0.58
CACNA2D1P54289 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.65■□□□□ 0.58
CACNA2D1P54289 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CACNA2D1P54289 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA2D1P54289 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA2D1P54289 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.58
CACNA2D1P54289 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA2D1P54289 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNA2D1P54289 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA2D1P54289 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA2D1P54289 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA2D1P54289 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CACNA2D1P54289 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA2D1P54289 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms