Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATXN3P54252 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATXN3P54252 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
ATXN3P54252 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ATXN3P54252 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATXN3P54252 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.01■□□□□ 0.47
ATXN3P54252 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.01■□□□□ 0.47
ATXN3P54252 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 SCARNA2-201ENST00000458748 420 ntBASIC18.01■□□□□ 0.47
ATXN3P54252 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.01■□□□□ 0.47
ATXN3P54252 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.01■□□□□ 0.47
ATXN3P54252 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.01■□□□□ 0.47
ATXN3P54252 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATXN3P54252 AC083906.6-201ENST00000641366 219 ntBASIC18.01■□□□□ 0.47
ATXN3P54252 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
ATXN3P54252 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 AC243591.1-201ENST00000452967 1364 ntBASIC18.01■□□□□ 0.47
ATXN3P54252 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATXN3P54252 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.01■□□□□ 0.47
ATXN3P54252 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATXN3P54252 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18■□□□□ 0.47
ATXN3P54252 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
ATXN3P54252 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 COX10-202ENST00000429152 875 ntTSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18■□□□□ 0.47
ATXN3P54252 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18■□□□□ 0.47
ATXN3P54252 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18■□□□□ 0.47
ATXN3P54252 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATXN3P54252 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ATXN3P54252 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 ESPNP-201ENST00000270691 2015 ntBASIC17.99■□□□□ 0.47
ATXN3P54252 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
ATXN3P54252 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ATXN3P54252 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATXN3P54252 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.99■□□□□ 0.47
ATXN3P54252 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.99■□□□□ 0.47
ATXN3P54252 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATXN3P54252 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATXN3P54252 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.99■□□□□ 0.47
ATXN3P54252 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.99■□□□□ 0.47
ATXN3P54252 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.99■□□□□ 0.47
ATXN3P54252 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.99■□□□□ 0.47
ATXN3P54252 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.99■□□□□ 0.47
ATXN3P54252 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms