Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGA2P52926 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.08■□□□□ 0.16
HMGA2P52926 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGA2P52926 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 OR6D1P-202ENST00000641007 5290 ntBASIC16.08■□□□□ 0.16
HMGA2P52926 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGA2P52926 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
HMGA2P52926 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGA2P52926 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGA2P52926 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGA2P52926 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGA2P52926 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGA2P52926 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 AC092053.1-201ENST00000605787 1936 ntBASIC16.07■□□□□ 0.16
HMGA2P52926 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 AL603756.1-201ENST00000606511 2163 ntBASIC16.07■□□□□ 0.16
HMGA2P52926 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGA2P52926 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGA2P52926 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGA2P52926 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGA2P52926 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGA2P52926 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HMGA2P52926 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGA2P52926 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGA2P52926 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGA2P52926 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms