Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL136038.3-201ENST00000561909 1096 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 AC124864.1-201ENST00000623408 392 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 AL590326.2-201ENST00000625139 305 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 AL645608.8-201ENST00000606034 2086 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF144AP50876 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF144AP50876 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF144AP50876 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RNF144AP50876 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF144AP50876 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF144AP50876 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF144AP50876 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF144AP50876 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF144AP50876 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF144AP50876 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RNF144AP50876 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 AC080080.1-201ENST00000625121 2420 ntBASIC16.39■□□□□ 0.21
RNF144AP50876 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RNF144AP50876 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF144AP50876 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF144AP50876 REXO1L11P-201ENST00000620964 1927 ntBASIC16.39■□□□□ 0.21
RNF144AP50876 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF144AP50876 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 AC009053.2-201ENST00000563701 2365 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF144AP50876 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 PCED1CP-201ENST00000419887 785 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 AC091607.1-201ENST00000490318 1060 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF144AP50876 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF144AP50876 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 AL592071.1-201ENST00000611956 408 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 IGHV3-41-201ENST00000613121 348 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 AL121956.5-201ENST00000625261 221 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 AL358472.4-201ENST00000633140 710 ntBASIC16.38■□□□□ 0.21
RNF144AP50876 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF144AP50876 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF144AP50876 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF144AP50876 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF144AP50876 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF144AP50876 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF144AP50876 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms