Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.96□□□□□ -0.18
CDC34P49427 KRT8P7-201ENST00000533003 1432 ntBASIC13.96□□□□□ -0.18
CDC34P49427 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC34P49427 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC34P49427 AL603756.1-201ENST00000606511 2163 ntBASIC13.96□□□□□ -0.18
CDC34P49427 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.96□□□□□ -0.18
CDC34P49427 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC34P49427 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDC34P49427 AC068587.6-202ENST00000641839 5619 ntBASIC13.96□□□□□ -0.18
CDC34P49427 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.96□□□□□ -0.18
CDC34P49427 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDC34P49427 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDC34P49427 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC34P49427 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 AC132938.6-201ENST00000623828 1655 ntBASIC13.95□□□□□ -0.18
CDC34P49427 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC34P49427 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC34P49427 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.95□□□□□ -0.18
CDC34P49427 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 AC008403.3-201ENST00000598924 454 ntBASIC13.95□□□□□ -0.18
CDC34P49427 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC34P49427 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 AC133041.1-202ENST00000642053 222 ntBASIC13.95□□□□□ -0.18
CDC34P49427 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC34P49427 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDC34P49427 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC34P49427 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CDC34P49427 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDC34P49427 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC34P49427 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC34P49427 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC34P49427 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC34P49427 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC34P49427 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC34P49427 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC34P49427 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC34P49427 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CDC34P49427 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 AC016396.2-201ENST00000562575 1417 ntBASIC13.93□□□□□ -0.18
CDC34P49427 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms