Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1A1P48729 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CSNK1A1P48729 FZD10-202ENST00000539839 3282 ntBASIC15.7■□□□□ 0.1
CSNK1A1P48729 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1A1P48729 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1A1P48729 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1A1P48729 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 AC125634.1-201ENST00000438758 1403 ntBASIC15.69■□□□□ 0.1
CSNK1A1P48729 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 REXO1L11P-201ENST00000620964 1927 ntBASIC15.69■□□□□ 0.1
CSNK1A1P48729 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 DRAXINP1-201ENST00000437611 948 ntBASIC15.69■□□□□ 0.1
CSNK1A1P48729 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CSNK1A1P48729 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1A1P48729 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 AC010460.3-201ENST00000511359 1579 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 AP002383.4-201ENST00000442518 975 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 LINC00265-3P-201ENST00000447588 903 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 TOB2P1-201ENST00000469761 992 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 TPSP2-201ENST00000561760 610 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 AC005336.2-201ENST00000593183 939 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 AL138831.2-201ENST00000606564 490 ntBASIC15.68■□□□□ 0.1
CSNK1A1P48729 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1A1P48729 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1A1P48729 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AC233702.3-201ENST00000578656 1387 ntBASIC15.67■□□□□ 0.1
CSNK1A1P48729 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 COX5BP2-201ENST00000392354 334 ntBASIC15.67■□□□□ 0.1
CSNK1A1P48729 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AC007967.3-201ENST00000434308 558 ntBASIC15.67■□□□□ 0.1
CSNK1A1P48729 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms