Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
GABRA4P48169 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.67■□□□□ 0.26
GABRA4P48169 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 AL589182.2-201ENST00000619332 1049 ntBASIC16.67■□□□□ 0.26
GABRA4P48169 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.67■□□□□ 0.26
GABRA4P48169 LINC01451-201ENST00000623792 534 ntBASIC16.67■□□□□ 0.26
GABRA4P48169 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GABRA4P48169 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GABRA4P48169 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABRA4P48169 AP002414.3-201ENST00000589352 1468 ntBASIC16.67■□□□□ 0.26
GABRA4P48169 AC008764.6-201ENST00000595909 2069 ntBASIC16.66■□□□□ 0.26
GABRA4P48169 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
GABRA4P48169 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GABRA4P48169 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.66■□□□□ 0.26
GABRA4P48169 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.66■□□□□ 0.26
GABRA4P48169 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 AF228730.7-201ENST00000641842 219 ntBASIC16.66■□□□□ 0.26
GABRA4P48169 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
GABRA4P48169 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABRA4P48169 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABRA4P48169 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GABRA4P48169 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 AC012317.2-201ENST00000623305 2251 ntBASIC16.65■□□□□ 0.26
GABRA4P48169 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.65■□□□□ 0.26
GABRA4P48169 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.65■□□□□ 0.26
GABRA4P48169 AC098831.1-202ENST00000438821 336 ntBASIC16.65■□□□□ 0.26
GABRA4P48169 AC092910.1-201ENST00000482027 1129 ntBASIC16.65■□□□□ 0.26
GABRA4P48169 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.65■□□□□ 0.26
GABRA4P48169 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 AC145285.3-201ENST00000564603 959 ntBASIC16.65■□□□□ 0.26
GABRA4P48169 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.65■□□□□ 0.26
GABRA4P48169 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
GABRA4P48169 AC004706.3-202ENST00000621574 984 ntBASIC16.65■□□□□ 0.26
GABRA4P48169 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRA4P48169 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRA4P48169 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
GABRA4P48169 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.65■□□□□ 0.26
GABRA4P48169 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GABRA4P48169 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms