Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.7■□□□□ 0.58
BRCC3P46736 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.7■□□□□ 0.58
BRCC3P46736 GPALPP1-207ENST00000611650 899 ntBASIC18.7■□□□□ 0.58
BRCC3P46736 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 AC005593.1-201ENST00000624894 515 ntBASIC18.7■□□□□ 0.58
BRCC3P46736 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
BRCC3P46736 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 NCF1C-201ENST00000438382 1427 ntBASIC18.69■□□□□ 0.58
BRCC3P46736 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCC3P46736 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.69■□□□□ 0.58
BRCC3P46736 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
BRCC3P46736 AC092865.5-201ENST00000545435 363 ntBASIC18.69■□□□□ 0.58
BRCC3P46736 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCC3P46736 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRCC3P46736 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.69■□□□□ 0.58
BRCC3P46736 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BRCC3P46736 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCC3P46736 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCC3P46736 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 KRT18P13-201ENST00000400056 1290 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 KRT18P3-201ENST00000451602 1288 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.68■□□□□ 0.58
BRCC3P46736 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 AL139424.1-201ENST00000607572 797 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 FAM197Y3-203ENST00000618346 717 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCC3P46736 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCC3P46736 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCC3P46736 AC135050.7-201ENST00000624508 2218 ntBASIC18.68■□□□□ 0.58
BRCC3P46736 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BRCC3P46736 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCC3P46736 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCC3P46736 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCC3P46736 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
BRCC3P46736 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCC3P46736 AC005104.2-201ENST00000427818 678 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms