Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MTHFRP42898 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFRP42898 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.37■□□□□ 0.53
MTHFRP42898 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.37■□□□□ 0.53
MTHFRP42898 AP000344.2-201ENST00000512987 629 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.37■□□□□ 0.53
MTHFRP42898 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
MTHFRP42898 AC096734.2-201ENST00000562054 433 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
MTHFRP42898 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFRP42898 AC004877.2-201ENST00000623941 599 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MTHFRP42898 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MTHFRP42898 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 AC132938.5-201ENST00000624980 1813 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 CROCCP3-202ENST00000420820 1947 ntBASIC18.37■□□□□ 0.53
MTHFRP42898 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFRP42898 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
MTHFRP42898 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MTHFRP42898 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.36■□□□□ 0.53
MTHFRP42898 TSEN15P1-201ENST00000423257 515 ntBASIC18.36■□□□□ 0.53
MTHFRP42898 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.36■□□□□ 0.53
MTHFRP42898 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFRP42898 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFRP42898 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFRP42898 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
MTHFRP42898 AL031432.2-201ENST00000566714 459 ntBASIC18.36■□□□□ 0.53
MTHFRP42898 AL928711.1-201ENST00000570165 459 ntBASIC18.36■□□□□ 0.53
MTHFRP42898 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
MTHFRP42898 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.36■□□□□ 0.53
MTHFRP42898 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFRP42898 AC027612.4-201ENST00000605371 583 ntBASIC18.36■□□□□ 0.53
MTHFRP42898 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MTHFRP42898 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MTHFRP42898 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFRP42898 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFRP42898 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MTHFRP42898 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
MTHFRP42898 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFRP42898 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 AL049757.1-201ENST00000616842 1596 ntBASIC18.35■□□□□ 0.53
MTHFRP42898 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 BCAR1-209ENST00000546196 1340 ntBASIC18.35■□□□□ 0.53
MTHFRP42898 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.35■□□□□ 0.53
MTHFRP42898 IGLL3P-201ENST00000412472 434 ntBASIC18.35■□□□□ 0.53
MTHFRP42898 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
MTHFRP42898 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms