Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RFC5P40937 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFC5P40937 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RFC5P40937 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC5P40937 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFC5P40937 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RFC5P40937 AC009336.1-201ENST00000608941 1553 ntBASIC19.41■□□□□ 0.7
RFC5P40937 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RFC5P40937 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC5P40937 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFC5P40937 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.41■□□□□ 0.7
RFC5P40937 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFC5P40937 LAGE3P1-201ENST00000425356 484 ntBASIC19.41■□□□□ 0.7
RFC5P40937 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RFC5P40937 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.41■□□□□ 0.7
RFC5P40937 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.41■□□□□ 0.7
RFC5P40937 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC5P40937 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.41■□□□□ 0.7
RFC5P40937 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.41■□□□□ 0.7
RFC5P40937 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC5P40937 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC5P40937 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC5P40937 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 AC148477.5-201ENST00000625164 1645 ntBASIC19.4■□□□□ 0.7
RFC5P40937 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RFC5P40937 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.4■□□□□ 0.7
RFC5P40937 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.4■□□□□ 0.7
RFC5P40937 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
RFC5P40937 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
RFC5P40937 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFC5P40937 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 AC004817.3-201ENST00000602957 2129 ntBASIC19.4■□□□□ 0.7
RFC5P40937 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
RFC5P40937 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 NOC2LP1-202ENST00000452600 2235 ntBASIC19.4■□□□□ 0.7
RFC5P40937 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC5P40937 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RFC5P40937 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC5P40937 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RFC5P40937 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFC5P40937 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC5P40937 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC5P40937 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC5P40937 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC5P40937 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RFC5P40937 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC5P40937 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC5P40937 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC5P40937 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC5P40937 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC5P40937 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RFC5P40937 AC139887.3-201ENST00000568585 713 ntBASIC19.39■□□□□ 0.69
RFC5P40937 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC5P40937 AL049840.3-201ENST00000602669 611 ntBASIC19.39■□□□□ 0.69
RFC5P40937 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
RFC5P40937 BX640515.1-201ENST00000617215 977 ntBASIC19.39■□□□□ 0.69
RFC5P40937 AL589182.2-201ENST00000619332 1049 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms