Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 KRT8P7-201ENST00000533003 1432 ntBASIC14.55□□□□□ -0.08
SNCAP37840 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNCAP37840 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNCAP37840 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.54□□□□□ -0.08
SNCAP37840 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
SNCAP37840 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.54□□□□□ -0.08
SNCAP37840 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNCAP37840 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNCAP37840 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCAP37840 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNCAP37840 AC008741.2-201ENST00000612792 3115 ntBASIC14.53□□□□□ -0.08
SNCAP37840 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.53□□□□□ -0.08
SNCAP37840 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.53□□□□□ -0.08
SNCAP37840 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SNCAP37840 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.53□□□□□ -0.08
SNCAP37840 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.53□□□□□ -0.08
SNCAP37840 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 AC036111.1-201ENST00000533973 1582 ntBASIC14.53□□□□□ -0.08
SNCAP37840 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 ABHD17AP1-201ENST00000358206 933 ntBASIC14.53□□□□□ -0.08
SNCAP37840 RPS2P55-201ENST00000397318 883 ntBASIC14.53□□□□□ -0.08
SNCAP37840 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 KRT18P23-201ENST00000435622 1283 ntBASIC14.53□□□□□ -0.08
SNCAP37840 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 AC107956.1-201ENST00000494359 873 ntBASIC14.53□□□□□ -0.08
SNCAP37840 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.53□□□□□ -0.08
SNCAP37840 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.53□□□□□ -0.08
SNCAP37840 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNCAP37840 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 LINC02199-201ENST00000506655 2702 ntBASIC14.53□□□□□ -0.08
SNCAP37840 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.53□□□□□ -0.08
SNCAP37840 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SNCAP37840 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCAP37840 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.52□□□□□ -0.08
SNCAP37840 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SNCAP37840 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.52□□□□□ -0.08
SNCAP37840 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.52□□□□□ -0.08
SNCAP37840 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms