Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.98■■□□□ 1.11
RFC4P35249 AC015911.4-201ENST00000588022 1070 ntBASIC21.98■■□□□ 1.11
RFC4P35249 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 ACTL9-202ENST00000612068 1252 ntBASIC21.98■■□□□ 1.11
RFC4P35249 AC009093.7-201ENST00000623853 1223 ntBASIC21.98■■□□□ 1.11
RFC4P35249 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.98■■□□□ 1.11
RFC4P35249 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RFC4P35249 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.97■■□□□ 1.11
RFC4P35249 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 AC002056.1-201ENST00000395613 760 ntBASIC21.97■■□□□ 1.11
RFC4P35249 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.97■■□□□ 1.11
RFC4P35249 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RFC4P35249 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.97■■□□□ 1.11
RFC4P35249 AC093214.1-201ENST00000511688 1107 ntBASIC21.97■■□□□ 1.11
RFC4P35249 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 AC026120.1-201ENST00000611536 926 ntBASIC21.97■■□□□ 1.11
RFC4P35249 Z92544.3-201ENST00000624747 417 ntBASIC21.97■■□□□ 1.11
RFC4P35249 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RFC4P35249 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.97■■□□□ 1.11
RFC4P35249 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC4P35249 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
RFC4P35249 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC4P35249 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RFC4P35249 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC4P35249 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.96■■□□□ 1.11
RFC4P35249 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC4P35249 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC4P35249 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.96■■□□□ 1.11
RFC4P35249 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RFC4P35249 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.96■■□□□ 1.11
RFC4P35249 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC4P35249 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.95■■□□□ 1.11
RFC4P35249 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RFC4P35249 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RFC4P35249 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 PMS2P4-201ENST00000412466 1052 ntBASIC21.95■■□□□ 1.1
RFC4P35249 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC4P35249 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.95■■□□□ 1.1
RFC4P35249 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.95■■□□□ 1.1
RFC4P35249 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RFC4P35249 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC4P35249 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC4P35249 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC4P35249 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RFC4P35249 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 AL671277.1-201ENST00000429656 993 ntBASIC21.94■■□□□ 1.1
RFC4P35249 AC005237.2-201ENST00000434368 219 ntBASIC21.94■■□□□ 1.1
RFC4P35249 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.94■■□□□ 1.1
RFC4P35249 INGX-202ENST00000489074 768 ntBASIC21.94■■□□□ 1.1
RFC4P35249 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms