Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC6A4P31645 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 AL355312.1-201ENST00000407115 2176 ntBASIC18.06■□□□□ 0.48
SLC6A4P31645 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A4P31645 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 PRYP5-201ENST00000451909 266 ntBASIC18.05■□□□□ 0.48
SLC6A4P31645 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 STK19B-204ENST00000512515 211 ntBASIC18.05■□□□□ 0.48
SLC6A4P31645 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 OR7E14P-202ENST00000530490 1290 ntBASIC18.05■□□□□ 0.48
SLC6A4P31645 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC6A4P31645 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
SLC6A4P31645 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A4P31645 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SLC6A4P31645 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A4P31645 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 AC009336.1-201ENST00000608941 1553 ntBASIC18.04■□□□□ 0.48
SLC6A4P31645 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC6A4P31645 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SLC6A4P31645 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC6A4P31645 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
SLC6A4P31645 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A4P31645 AC107918.4-202ENST00000641623 219 ntBASIC18.04■□□□□ 0.48
SLC6A4P31645 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A4P31645 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A4P31645 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A4P31645 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A4P31645 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC6A4P31645 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A4P31645 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC6A4P31645 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.03■□□□□ 0.48
SLC6A4P31645 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC6A4P31645 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC6A4P31645 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 LINC01451-201ENST00000623792 534 ntBASIC18.03■□□□□ 0.48
SLC6A4P31645 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SLC6A4P31645 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A4P31645 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC6A4P31645 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC6A4P31645 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC6A4P31645 IL9RP2-201ENST00000423948 1312 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms