Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
HOXC8P31273 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HOXC8P31273 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC8P31273 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HOXC8P31273 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 CYMP-203ENST00000474680 1263 ntBASIC19.07■□□□□ 0.64
HOXC8P31273 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 AP000344.2-201ENST00000512987 629 ntBASIC19.07■□□□□ 0.64
HOXC8P31273 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 AL513210.1-201ENST00000629608 234 ntBASIC19.07■□□□□ 0.64
HOXC8P31273 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC8P31273 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
HOXC8P31273 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC8P31273 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HOXC8P31273 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC8P31273 AP002472.1-201ENST00000577490 586 ntBASIC19.06■□□□□ 0.64
HOXC8P31273 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXC8P31273 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC8P31273 AC068137.2-201ENST00000605408 478 ntBASIC19.06■□□□□ 0.64
HOXC8P31273 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC8P31273 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HOXC8P31273 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HOXC8P31273 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HOXC8P31273 BICD1-207ENST00000551848 1962 ntBASIC19.06■□□□□ 0.64
HOXC8P31273 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXC8P31273 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC8P31273 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC8P31273 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC8P31273 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
HOXC8P31273 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXC8P31273 AC087163.2-201ENST00000457299 853 ntBASIC19.05■□□□□ 0.64
HOXC8P31273 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HOXC8P31273 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXC8P31273 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC8P31273 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC8P31273 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC8P31273 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXC8P31273 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.04■□□□□ 0.64
HOXC8P31273 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXC8P31273 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC8P31273 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HOXC8P31273 ADH5P3-201ENST00000433842 1137 ntBASIC19.04■□□□□ 0.64
HOXC8P31273 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HOXC8P31273 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.04■□□□□ 0.64
HOXC8P31273 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC8P31273 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC8P31273 LINC00304-203ENST00000565008 1864 ntBASIC19.04■□□□□ 0.64
HOXC8P31273 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC8P31273 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC8P31273 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HOXC8P31273 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms