Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 AF228730.7-201ENST00000641842 219 ntBASIC15.18■□□□□ 0.02
CD40P25942 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.18■□□□□ 0.02
CD40P25942 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CD40P25942 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CD40P25942 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 SLC25A1P1-201ENST00000528351 927 ntBASIC15.17■□□□□ 0.02
CD40P25942 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.17■□□□□ 0.02
CD40P25942 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 AC105339.3-201ENST00000560043 636 ntBASIC15.17■□□□□ 0.02
CD40P25942 AC012640.2-201ENST00000561606 901 ntBASIC15.17■□□□□ 0.02
CD40P25942 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.17■□□□□ 0.02
CD40P25942 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD40P25942 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD40P25942 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.16■□□□□ 0.02
CD40P25942 MYCLP1-201ENST00000372451 1075 ntBASIC15.16■□□□□ 0.02
CD40P25942 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CD40P25942 SIGLEC30P-201ENST00000455569 941 ntBASIC15.16■□□□□ 0.02
CD40P25942 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.16■□□□□ 0.02
CD40P25942 RPL13AP23-201ENST00000480739 586 ntBASIC15.16■□□□□ 0.02
CD40P25942 AC092910.1-201ENST00000482027 1129 ntBASIC15.16■□□□□ 0.02
CD40P25942 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.16■□□□□ 0.02
CD40P25942 STK25P1-201ENST00000585406 838 ntBASIC15.16■□□□□ 0.02
CD40P25942 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CD40P25942 AL354751.1-201ENST00000412768 1863 ntBASIC15.16■□□□□ 0.02
CD40P25942 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 AC135050.7-201ENST00000624508 2218 ntBASIC15.16■□□□□ 0.02
CD40P25942 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD40P25942 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.16■□□□□ 0.02
CD40P25942 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms