Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.88□□□□□ -0.03
COL8A2P25067 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.88□□□□□ -0.03
COL8A2P25067 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 AC009949.1-201ENST00000623048 1830 ntBASIC14.88□□□□□ -0.03
COL8A2P25067 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
COL8A2P25067 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.88□□□□□ -0.03
COL8A2P25067 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.88□□□□□ -0.03
COL8A2P25067 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.88□□□□□ -0.03
COL8A2P25067 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.88□□□□□ -0.03
COL8A2P25067 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.88□□□□□ -0.03
COL8A2P25067 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
COL8A2P25067 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.88□□□□□ -0.03
COL8A2P25067 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
COL8A2P25067 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL8A2P25067 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
COL8A2P25067 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 RPS2P28-201ENST00000314255 741 ntBASIC14.87□□□□□ -0.03
COL8A2P25067 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 BX005266.1-201ENST00000473402 457 ntBASIC14.87□□□□□ -0.03
COL8A2P25067 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.87□□□□□ -0.03
COL8A2P25067 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.87□□□□□ -0.03
COL8A2P25067 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.87□□□□□ -0.03
COL8A2P25067 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.87□□□□□ -0.03
COL8A2P25067 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 MTDHP4-201ENST00000600287 670 ntBASIC14.87□□□□□ -0.03
COL8A2P25067 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 AF228730.7-201ENST00000641842 219 ntBASIC14.87□□□□□ -0.03
COL8A2P25067 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 AC004817.3-201ENST00000602957 2129 ntBASIC14.87□□□□□ -0.03
COL8A2P25067 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.87□□□□□ -0.03
COL8A2P25067 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL8A2P25067 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.87□□□□□ -0.03
COL8A2P25067 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL8A2P25067 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 AC243591.1-201ENST00000452967 1364 ntBASIC14.86□□□□□ -0.03
COL8A2P25067 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
COL8A2P25067 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms