Protein–RNA interactions for Protein: P25024

CXCR1, C-X-C chemokine receptor type 1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR1P25024 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 AC096633.1-201ENST00000422446 749 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 CHCHD2P8-201ENST00000429873 447 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.08■□□□□ 0.16
CXCR1P25024 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR1P25024 VENTXP7-201ENST00000475503 772 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.08■□□□□ 0.16
CXCR1P25024 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.08■□□□□ 0.16
CXCR1P25024 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CXCR1P25024 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CXCR1P25024 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 AC116407.4-201ENST00000623319 1061 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CXCR1P25024 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR1P25024 AC097374.2-201ENST00000618617 1306 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 IER3-202ENST00000376377 1350 ntBASIC16.08■□□□□ 0.16
CXCR1P25024 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.08■□□□□ 0.16
CXCR1P25024 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR1P25024 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 REXO1L11P-201ENST00000620964 1927 ntBASIC16.07■□□□□ 0.16
CXCR1P25024 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCR1P25024 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR1P25024 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR1P25024 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CXCR1P25024 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR1P25024 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CXCR1P25024 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR1P25024 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR1P25024 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CXCR1P25024 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 AC016734.2-201ENST00000624325 1377 ntBASIC16.06■□□□□ 0.16
CXCR1P25024 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 ARMC10P1-201ENST00000313754 855 ntBASIC16.06■□□□□ 0.16
CXCR1P25024 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR1P25024 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXCR1P25024 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR1P25024 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR1P25024 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms