Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
CHMP24386 NKILA-202ENST00000614771 2598 ntBASIC16.49■□□□□ 0.23
CHMP24386 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHMP24386 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHMP24386 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHMP24386 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.49■□□□□ 0.23
CHMP24386 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP24386 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP24386 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP24386 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP24386 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.49■□□□□ 0.23
CHMP24386 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP24386 GPR32P1-201ENST00000601788 811 ntBASIC16.49■□□□□ 0.23
CHMP24386 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.49■□□□□ 0.23
CHMP24386 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP24386 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP24386 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 AC011676.5-201ENST00000624864 2660 ntBASIC16.48■□□□□ 0.23
CHMP24386 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP24386 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 IGHGP-201ENST00000390555 1178 ntBASIC16.48■□□□□ 0.23
CHMP24386 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP24386 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP24386 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP24386 TSPY22P-201ENST00000427496 604 ntBASIC16.48■□□□□ 0.23
CHMP24386 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 AC113404.2-201ENST00000507884 177 ntBASIC16.48■□□□□ 0.23
CHMP24386 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP24386 RNF126P1-202ENST00000569893 925 ntBASIC16.48■□□□□ 0.23
CHMP24386 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP24386 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP24386 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP24386 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CHMP24386 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 AL138688.1-201ENST00000624851 1594 ntBASIC16.47■□□□□ 0.23
CHMP24386 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms