Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
DEFA4P12838 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.37□□□□□ -0.11
DEFA4P12838 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.36□□□□□ -0.11
DEFA4P12838 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.36□□□□□ -0.11
DEFA4P12838 AC140113.3-201ENST00000605663 199 ntBASIC14.36□□□□□ -0.11
DEFA4P12838 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.36□□□□□ -0.11
DEFA4P12838 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.36□□□□□ -0.11
DEFA4P12838 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.36□□□□□ -0.11
DEFA4P12838 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEFA4P12838 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 ECEL1P3-201ENST00000427961 737 ntBASIC14.35□□□□□ -0.11
DEFA4P12838 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 AC034232.1-201ENST00000506026 1064 ntBASIC14.35□□□□□ -0.11
DEFA4P12838 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.35□□□□□ -0.11
DEFA4P12838 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.35□□□□□ -0.11
DEFA4P12838 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
DEFA4P12838 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DEFA4P12838 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEFA4P12838 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.35□□□□□ -0.11
DEFA4P12838 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms