Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AL139384.1-201ENST00000612143 3047 ntBASIC17.71■□□□□ 0.43
THRAP10827 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
THRAP10827 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
THRAP10827 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
THRAP10827 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 AL023806.1-201ENST00000603994 1649 ntBASIC17.7■□□□□ 0.42
THRAP10827 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 AP000593.1-201ENST00000393668 712 ntBASIC17.7■□□□□ 0.42
THRAP10827 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 TOB2P1-201ENST00000469761 992 ntBASIC17.7■□□□□ 0.42
THRAP10827 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.7■□□□□ 0.42
THRAP10827 AP000867.3-201ENST00000524675 377 ntBASIC17.7■□□□□ 0.42
THRAP10827 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.7■□□□□ 0.42
THRAP10827 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.7■□□□□ 0.42
THRAP10827 GPR32P1-201ENST00000601788 811 ntBASIC17.7■□□□□ 0.42
THRAP10827 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.7■□□□□ 0.42
THRAP10827 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.7■□□□□ 0.42
THRAP10827 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
THRAP10827 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
THRAP10827 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.69■□□□□ 0.42
THRAP10827 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.69■□□□□ 0.42
THRAP10827 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.69■□□□□ 0.42
THRAP10827 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.69■□□□□ 0.42
THRAP10827 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.69■□□□□ 0.42
THRAP10827 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 AC024563.2-201ENST00000603282 481 ntBASIC17.69■□□□□ 0.42
THRAP10827 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.69■□□□□ 0.42
THRAP10827 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.69■□□□□ 0.42
THRAP10827 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.69■□□□□ 0.42
THRAP10827 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
THRAP10827 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THRAP10827 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THRAP10827 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THRAP10827 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms