Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RARAP10276 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.5■□□□□ 0.55
RARAP10276 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.5■□□□□ 0.55
RARAP10276 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.5■□□□□ 0.55
RARAP10276 AC011498.5-201ENST00000592027 486 ntBASIC18.5■□□□□ 0.55
RARAP10276 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.5■□□□□ 0.55
RARAP10276 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RARAP10276 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RARAP10276 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RARAP10276 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.49■□□□□ 0.55
RARAP10276 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RARAP10276 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RARAP10276 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RARAP10276 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RARAP10276 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.49■□□□□ 0.55
RARAP10276 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.49■□□□□ 0.55
RARAP10276 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.49■□□□□ 0.55
RARAP10276 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RARAP10276 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.49■□□□□ 0.55
RARAP10276 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RARAP10276 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.49■□□□□ 0.55
RARAP10276 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARAP10276 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
RARAP10276 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RARAP10276 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RARAP10276 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.48■□□□□ 0.55
RARAP10276 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 RN7SL606P-201ENST00000472779 293 ntBASIC18.48■□□□□ 0.55
RARAP10276 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 AL121956.5-201ENST00000625261 221 ntBASIC18.48■□□□□ 0.55
RARAP10276 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.48■□□□□ 0.55
RARAP10276 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.48■□□□□ 0.55
RARAP10276 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RARAP10276 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.48■□□□□ 0.55
RARAP10276 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.47■□□□□ 0.55
RARAP10276 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.47■□□□□ 0.55
RARAP10276 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.47■□□□□ 0.55
RARAP10276 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RARAP10276 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.47■□□□□ 0.55
RARAP10276 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.47■□□□□ 0.55
RARAP10276 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 GUSBP12-201ENST00000513727 720 ntBASIC18.47■□□□□ 0.55
RARAP10276 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.47■□□□□ 0.55
RARAP10276 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
RARAP10276 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.47■□□□□ 0.55
RARAP10276 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.47■□□□□ 0.55
RARAP10276 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RARAP10276 AC005332.1-201ENST00000577698 1310 ntBASIC18.47■□□□□ 0.55
RARAP10276 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms