Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
CD48P09326 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.25■□□□□ 0.51
CD48P09326 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.25■□□□□ 0.51
CD48P09326 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.24■□□□□ 0.51
CD48P09326 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
CD48P09326 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CD48P09326 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.24■□□□□ 0.51
CD48P09326 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.24■□□□□ 0.51
CD48P09326 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 AP002414.4-201ENST00000589764 1148 ntBASIC18.24■□□□□ 0.51
CD48P09326 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.24■□□□□ 0.51
CD48P09326 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.24■□□□□ 0.51
CD48P09326 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD48P09326 KRT18P1-202ENST00000452408 1331 ntBASIC18.23■□□□□ 0.51
CD48P09326 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
CD48P09326 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.23■□□□□ 0.51
CD48P09326 TPSP2-201ENST00000561760 610 ntBASIC18.23■□□□□ 0.51
CD48P09326 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.23■□□□□ 0.51
CD48P09326 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.23■□□□□ 0.51
CD48P09326 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
CD48P09326 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD48P09326 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CD48P09326 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 AC233702.3-201ENST00000578656 1387 ntBASIC18.22■□□□□ 0.51
CD48P09326 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 AC246785.2-201ENST00000432512 513 ntBASIC18.22■□□□□ 0.51
CD48P09326 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.22■□□□□ 0.51
CD48P09326 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 AC109462.3-201ENST00000573934 613 ntBASIC18.22■□□□□ 0.51
CD48P09326 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CD48P09326 AL139327.4-201ENST00000612362 153 ntBASIC18.22■□□□□ 0.51
CD48P09326 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 AP000550.4-202ENST00000639755 178 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms