Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.47□□□□□ -0.57
TRACP01848 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
TRACP01848 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.47□□□□□ -0.57
TRACP01848 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.47□□□□□ -0.57
TRACP01848 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
TRACP01848 OR2I1P-209ENST00000641730 5365 ntBASIC11.47□□□□□ -0.57
TRACP01848 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.47□□□□□ -0.57
TRACP01848 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRACP01848 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
TRACP01848 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
TRACP01848 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRACP01848 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRACP01848 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC11.46□□□□□ -0.57
TRACP01848 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.46□□□□□ -0.57
TRACP01848 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 AC016396.2-201ENST00000562575 1417 ntBASIC11.46□□□□□ -0.57
TRACP01848 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRACP01848 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
TRACP01848 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC11.46□□□□□ -0.57
TRACP01848 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
TRACP01848 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 AL390719.1-204ENST00000412397 1219 ntBASIC11.46□□□□□ -0.57
TRACP01848 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRACP01848 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 AC131281.2-201ENST00000520478 145 ntBASIC11.46□□□□□ -0.57
TRACP01848 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.46□□□□□ -0.57
TRACP01848 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC11.46□□□□□ -0.57
TRACP01848 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.46□□□□□ -0.57
TRACP01848 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRACP01848 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TRACP01848 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TRACP01848 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.46□□□□□ -0.58
TRACP01848 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.46□□□□□ -0.58
TRACP01848 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.46□□□□□ -0.58
TRACP01848 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRACP01848 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TRACP01848 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
TRACP01848 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.45□□□□□ -0.58
TRACP01848 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.45□□□□□ -0.58
TRACP01848 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TRACP01848 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.45□□□□□ -0.58
TRACP01848 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.45□□□□□ -0.58
TRACP01848 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
TRACP01848 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC11.45□□□□□ -0.58
TRACP01848 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
TRACP01848 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRACP01848 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRACP01848 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms