Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 NME2P1-201ENST00000426182 414 ntBASIC19.94■□□□□ 0.78
ALDH1A1P00352 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 IGHV3-62-201ENST00000520057 340 ntBASIC19.94■□□□□ 0.78
ALDH1A1P00352 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 KRT8P23-201ENST00000560090 1207 ntBASIC19.94■□□□□ 0.78
ALDH1A1P00352 AL161645.1-201ENST00000622716 1255 ntBASIC19.94■□□□□ 0.78
ALDH1A1P00352 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ALDH1A1P00352 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALDH1A1P00352 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 AC069120.2-201ENST00000524091 540 ntBASIC19.93■□□□□ 0.78
ALDH1A1P00352 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 AC025048.6-201ENST00000634326 1161 ntBASIC19.93■□□□□ 0.78
ALDH1A1P00352 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALDH1A1P00352 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ALDH1A1P00352 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 PIN1P1-201ENST00000412108 996 ntBASIC19.92■□□□□ 0.78
ALDH1A1P00352 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 AC026150.2-201ENST00000564693 1156 ntBASIC19.92■□□□□ 0.78
ALDH1A1P00352 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms