Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 ABALON-201ENST00000629058 1903 ntBASIC15.68■□□□□ 0.1
CNOT4O95628 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 KRT18P55-202ENST00000578578 1546 ntBASIC15.68■□□□□ 0.1
CNOT4O95628 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 AC005332.8-201ENST00000622750 2735 ntBASIC15.67■□□□□ 0.1
CNOT4O95628 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CNOT4O95628 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 RCN1P2-201ENST00000398357 915 ntBASIC15.67■□□□□ 0.1
CNOT4O95628 AC103564.2-201ENST00000432853 1299 ntBASIC15.67■□□□□ 0.1
CNOT4O95628 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 AP002469.2-201ENST00000531724 424 ntBASIC15.67■□□□□ 0.1
CNOT4O95628 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT4O95628 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.67■□□□□ 0.1
CNOT4O95628 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CNOT4O95628 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.67■□□□□ 0.1
CNOT4O95628 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT4O95628 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 REXO1L9P-201ENST00000604264 2108 ntBASIC15.67■□□□□ 0.1
CNOT4O95628 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT4O95628 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT4O95628 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT4O95628 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms